Systems News

On Monday, 21 July 2014, the Portal to Information Environment (pIE) will be down for maintenance, starting at 0800 CT. At this time, the outage will be for an unknown amount of time, but is expected to return to service by late afternoon on 21 July 2014. Additional information will be provided as it is received.
The HPCMP Centers Team is pleased to announce the issuance of the Summer 2014 edition of HPC Insights. This edition contains a special report on DREN III, several articles detailing HPC at work within the DOD, DSRC enhancements, and preview photos of two of the three new TI-13 Cray XC30 systems, Lightning (AFRL DSRC) and Armstrong (Navy DSRC) being delivered to their respective centers. To read the electronic version, please visit http://centers.hpc.mil/news/hpcInsights/hpcinsights_summer2014.pdf. A print version will be delivered to pIE users within the next several weeks. For more information on the TI-13 HPC systems being installed, please visit http://centers.hpc.mil/systems/upcoming.html.

Modules available on Garnet after 23 July 2014:

Compiler versions:
pgi/12.4.0
pgi/13.10.0
pgi/13.6.0(default)
pgi/14.2.0
intel/12.1.5.339
intel/13.1.2.183
intel/14.0.2.144(default)
gcc/4.7.1
gcc/4.8.0
gcc/4.8.1
gcc/4.8.2(default)
cce/8.2.2(default)
cce/8.2.5
chapel/1.3.0
chapel/1.7.0.1(default)
PrgEnv-cray/4.2.34
PrgEnv-gnu/4.2.34
PrgEnv-intel/4.2.34
PrgEnv-pgi/4.2.34(default)

Parallel Libraries:
cray-mpich/6.0.0(default)
cray-mpich/6.2.1
cray-mpich/6.3.0
cray-shmem/6.0.0(default)
cray-shmem/6.2.1
cray-shmem/6.3.0
cray-ga/5.1.0.2(default)
cray-ga/5.1.0.4
ntk/1.5.0(default)
onesided/1.5.0(default)
ccm/2.2.0-1.0402.46086.4.120(default)

NetCDF:
cray-netcdf/4.3.0(default)
cray-netcdf/4.3.1
cray-netcdf-hdf5parallel/4.3.0(default)
cray-netcdf-hdf5parallel/4.3.1
cray-parallel-netcdf/1.3.1.1(default)
cray-parallel-netcdf/1.4.0

PETSc:
cray-petsc/3.3.06
cray-petsc/3.4.3.0(default)
cray-petsc/3.4.3.1
cray-petsc-complex/3.3.06
cray-petsc-complex/3.4.3.0(default)
cray-petsc-complex/3.4.3.1

HDF5:
cray-hdf5/1.8.11(default)
cray-hdf5/1.8.12
cray-hdf5-parallel/1.8.11(default)
cray-hdf5-parallel/1.8.12

Math and Scientific Libraries:
cray-libsci/12.1.00(default)
cray-libsci/12.1.3
cray-libsci/12.2.0
cray-tpsl/1.3.04(default)
cray-tpsl/1.4.0
fftw/2.1.5.5
fftw/2.1.5.6
fftw/3.3.0.3
fftw/3.3.0.4(default)
cray-trilinos/11.2.2.0
cray-trilinos/11.4.1.0(default)
cray-trilinos/11.6.1.0
acml/5.3.1(default)

Debugging and Performance Tools:
atp/1.6.3
atp/1.7.1(default)
cray-lgdb/2.2.3(default)
cray-lgdb/2.2.4
cray-ccdb/1.0.2(default)
papi/5.1.1(default)
papi/5.2.0
papi/5.3.0
perftools/6.1.3(default)
perftools/6.1.4
perftools-lite/6.1.3(default)
perftools-lite/6.1.4

Java:
java/jdk1.7.0_07
java/jdk1.7.0_45(default)

Assorted modules:
iobuf/2.0.4
iobuf/2.0.5(default)
xt-asyncpe/5.21
xt-asyncpe/5.24(default)
xt-asyncpe/5.26

Garnet has older modules that are incompatible with the new OS or have been deprecated. There will be a general module cleanup on 23 July.

Modules that will be removed:

Compiler versions:
gcc/4.1.2
gcc/4.2.4
gcc/4.4.2
gcc/4.4.4
gcc/4.5.1
gcc/4.6.0
gcc/4.6.1
gcc/4.6.3
cce/8.1.9
chapel/1.2.0

Parallel Libraries:
(Note: cray-mpich2 modules are the same as cray-mpich which will remain.)
cray-mpich2/5.5.4
cray-mpich2/5.6.5
cray-mpich2/6.0.0
cray-mpich2/6.2.0
cray-mpich2/6.2.1
cray-mpich2/6.3.0
cray-mpich/6.2.0
cray-shmem/5.5.4
cray-shmem/5.6.5
cray-shmem/6.2.0
ga/4.3.2
ga/4.3.5
ga/5.0.2
ntk/1.0.0
ntk/1.3.0
onesided/1.0.0
onesided/1.3.0

NetCDF:
netcdf/3.6.2
netcdf/4.1.1.0
netcdf/4.1.3
netcdf/4.2.0
netcdf/4.3.0
netcdf-hdf5parallel/4.1.1.0
netcdf-hdf5parallel/4.1.3
netcdf-hdf5parallel/4.2.0
netcdf-hdf5parallel/4.3.0

PETSc:
cray-petsc/3.3.00
cray-petsc-complex/3.3.00
petsc/3.1.04
petsc/3.1.08
petsc/3.2.01
petsc/3.3.00
petsc-complex/3.1.04
petsc-complex/3.1.08
petsc-complex/3.2.01
petsc-complex/3.3.00

HDF5:
hdf5/1.8.11
hdf5/1.8.5.0
hdf5/1.8.7
hdf5/1.8.8
hdf5-parallel/1.8.11
hdf5-parallel/1.8.5.0
hdf5-parallel/1.8.7
hdf5-parallel/1.8.8

Math and Scientific Libraries:
cray-libsci/11.1.01
cray-tpsl/1.3.00
cray-trilinos/10.12.1.0
fftw/2.1.5.2
fftw/2.1.5.3
fftw/2.1.5.4
fftw/3.2.2.1
fftw/3.3.0.0
fftw/3.3.0.1
tpsl/1.1.00
tpsl/1.2.00
tpsl/1.3.00
trilinos/10.12.1.0
trilinos/10.6.0
trilinos/10.6.2.0
trilinos/10.8.3.0
acml/4.4.0
acml/5.1.0
acml/5.3.0

Debugging and Performance Tools:
atp/1.0.3
atp/1.2.1
atp/1.4.4
atp/1.5.1
cray-lgdb/2.1.0
cray-ccdb/1.0.0
papi/4.3.0.1
papi/5.0.0
perftools/6.0.0
perftools/6.1.1
perftools-lite/6.1.1
apprentice2/5.1.0

Java:
java/jdk1.6.0_20
java/jdk1.6.0_24
java/jdk1.7.0_03

Assorted modules:
iobuf/2.0.2
cudatoolkit/4.1.28
cudatoolkit/5.5.20-1.0402.7700.8.1
xt-asyncpe/5.00
xt-asyncpe/5.10
xt-asyncpe/5.14
xt-libsci/12.2.0

Modules that will remain are listed on ERDC DSRC web site: http://www.erdc.hpc.mil/news/viewNews.html?ID=ERDC-12