Systems News

The HPCMP Centers Team is pleased to announce the issuance of the Summer 2014 edition of HPC Insights. This edition contains a special report on DREN III, several articles detailing HPC at work within the DOD, DSRC enhancements, and preview photos of two of the three new TI-13 Cray XC30 systems, Lightning (AFRL DSRC) and Armstrong (Navy DSRC) being delivered to their respective centers. To read the electronic version, please visit http://centers.hpc.mil/news/hpcInsights/hpcinsights_summer2014.pdf. A print version will be delivered to pIE users within the next several weeks. For more information on the TI-13 HPC systems being installed, please visit http://centers.hpc.mil/systems/upcoming.html.

Modules available on Garnet after 29 July 2014:

Compiler versions:
pgi/12.4.0
pgi/13.10.0
pgi/13.6.0(default)
pgi/14.2.0
intel/12.1.5.339
intel/13.1.2.183
intel/14.0.2.144(default)
gcc/4.7.1
gcc/4.8.0
gcc/4.8.1
gcc/4.8.2(default)
cce/8.2.2(default)
cce/8.2.5
chapel/1.3.0
chapel/1.7.0.1(default)
PrgEnv-cray/4.2.34
PrgEnv-gnu/4.2.34
PrgEnv-intel/4.2.34
PrgEnv-pgi/4.2.34(default)

Parallel Libraries:
cray-mpich/6.0.0(default)
cray-mpich/6.2.1
cray-mpich/6.3.0
cray-shmem/6.0.0(default)
cray-shmem/6.2.1
cray-shmem/6.3.0
cray-ga/5.1.0.2(default)
cray-ga/5.1.0.4
ntk/1.5.0(default)
onesided/1.5.0(default)
ccm/2.2.0-1.0402.46086.4.120(default)

NetCDF:
cray-netcdf/4.3.0(default)
cray-netcdf/4.3.1
cray-netcdf-hdf5parallel/4.3.0(default)
cray-netcdf-hdf5parallel/4.3.1
cray-parallel-netcdf/1.3.1.1(default)
cray-parallel-netcdf/1.4.0

PETSc:
cray-petsc/3.3.06
cray-petsc/3.4.3.0(default)
cray-petsc/3.4.3.1
cray-petsc-complex/3.3.06
cray-petsc-complex/3.4.3.0(default)
cray-petsc-complex/3.4.3.1

HDF5:
cray-hdf5/1.8.11(default)
cray-hdf5/1.8.12
cray-hdf5-parallel/1.8.11(default)
cray-hdf5-parallel/1.8.12

Math and Scientific Libraries:
cray-libsci/12.1.00(default)
cray-libsci/12.1.3
cray-libsci/12.2.0
cray-tpsl/1.3.04(default)
cray-tpsl/1.4.0
fftw/2.1.5.5
fftw/2.1.5.6
fftw/3.3.0.3
fftw/3.3.0.4(default)
cray-trilinos/11.2.2.0
cray-trilinos/11.4.1.0(default)
cray-trilinos/11.6.1.0
acml/5.3.1(default)

Debugging and Performance Tools:
atp/1.6.3
atp/1.7.1(default)
cray-lgdb/2.2.3(default)
cray-lgdb/2.2.4
cray-ccdb/1.0.2(default)
papi/5.1.1(default)
papi/5.2.0
papi/5.3.0
perftools/6.1.3(default)
perftools/6.1.4
perftools-lite/6.1.3(default)
perftools-lite/6.1.4

Java:
java/jdk1.7.0_07
java/jdk1.7.0_45(default)

Assorted modules:
iobuf/2.0.4
iobuf/2.0.5(default)
xt-asyncpe/5.21
xt-asyncpe/5.24(default)
xt-asyncpe/5.26

Garnet has older modules that are incompatible with the new OS or have been deprecated. There will be a general module cleanup on 29 July.

Modules that will be removed:

Compiler versions:
gcc/4.1.2
gcc/4.2.4
gcc/4.4.2
gcc/4.4.4
gcc/4.5.1
gcc/4.6.0
gcc/4.6.1
gcc/4.6.3
cce/8.1.9
chapel/1.2.0

Parallel Libraries:
(Note: cray-mpich2 modules are the same as cray-mpich which will remain.)
cray-mpich2/5.5.4
cray-mpich2/5.6.5
cray-mpich2/6.0.0
cray-mpich2/6.2.0
cray-mpich2/6.2.1
cray-mpich2/6.3.0
cray-mpich/6.2.0
cray-shmem/5.5.4
cray-shmem/5.6.5
cray-shmem/6.2.0
ga/4.3.2
ga/4.3.5
ga/5.0.2
ntk/1.0.0
ntk/1.3.0
onesided/1.0.0
onesided/1.3.0

NetCDF:
netcdf/3.6.2
netcdf/4.1.1.0
netcdf/4.1.3
netcdf/4.2.0
netcdf/4.3.0
netcdf-hdf5parallel/4.1.1.0
netcdf-hdf5parallel/4.1.3
netcdf-hdf5parallel/4.2.0
netcdf-hdf5parallel/4.3.0

PETSc:
cray-petsc/3.3.00
cray-petsc-complex/3.3.00
petsc/3.1.04
petsc/3.1.08
petsc/3.2.01
petsc/3.3.00
petsc-complex/3.1.04
petsc-complex/3.1.08
petsc-complex/3.2.01
petsc-complex/3.3.00

HDF5:
hdf5/1.8.11
hdf5/1.8.5.0
hdf5/1.8.7
hdf5/1.8.8
hdf5-parallel/1.8.11
hdf5-parallel/1.8.5.0
hdf5-parallel/1.8.7
hdf5-parallel/1.8.8

Math and Scientific Libraries:
cray-libsci/11.1.01
cray-tpsl/1.3.00
cray-trilinos/10.12.1.0
fftw/2.1.5.2
fftw/2.1.5.3
fftw/2.1.5.4
fftw/3.2.2.1
fftw/3.3.0.0
fftw/3.3.0.1
tpsl/1.1.00
tpsl/1.2.00
tpsl/1.3.00
trilinos/10.12.1.0
trilinos/10.6.0
trilinos/10.6.2.0
trilinos/10.8.3.0
acml/4.4.0
acml/5.1.0
acml/5.3.0

Debugging and Performance Tools:
atp/1.0.3
atp/1.2.1
atp/1.4.4
atp/1.5.1
cray-lgdb/2.1.0
cray-ccdb/1.0.0
papi/4.3.0.1
papi/5.0.0
perftools/6.0.0
perftools/6.1.1
perftools-lite/6.1.1
apprentice2/5.1.0

Java:
java/jdk1.6.0_20
java/jdk1.6.0_24
java/jdk1.7.0_03

Assorted modules:
iobuf/2.0.2
cudatoolkit/4.1.28
cudatoolkit/5.5.20-1.0402.7700.8.1
xt-asyncpe/5.00
xt-asyncpe/5.10
xt-asyncpe/5.14
xt-libsci/12.2.0

Modules that will remain are listed on ERDC DSRC web site: http://www.erdc.hpc.mil/news/viewNews.html?ID=ERDC-12